Research Article |
Corresponding author: Carmen Duque-Amado ( carmen.duque@mncn.csic.es ) Academic editor: Michael Schmitt
© 2024 Carmen Duque-Amado, Mario García-París, Alberto Sánchez-Vialas.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Duque-Amado C, García-París M, Sánchez-Vialas A (2024) Phylogeographic analyses of western Palearctic Scaurus (Coleoptera: Tenebrionidae) reveal undetected taxonomic substructure along the pre-Saharian Atlantic Coast of western Africa. Arthropod Systematics & Phylogeny 82: 707-717. https://doi.org/10.3897/asp.82.e132546
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Phylogeography stands as a key tool to explore evolutionary patterns and processes, playing a crucial role in delimiting evolutionary units. Identifying these units is essential for providing robust taxonomic decisions. In this study, we present a comprehensive phylogeographical framework of Scaurus uncinus (Forster, 1771) and Scaurus gigas Waltl, 1835 across the Iberian Peninsula and North-western Africa, where they are widely co-distributed, coexisting in several localities on both sides of Strait of Gibraltar. Our results show that the Strait of Gibraltar did not act as a geographical barrier for these species, revealing shared mitochondrial haplotypes and nuclear alleles between populations on both sides. However, the Souss Valley in Morocco appears to have historically served as a significant geographical barrier within the S. gigas lineage, leading to the divergence of two morphologically distinct sublineages, one to the north (S. gigas) and the other to the south (S. ferreri stat. nov.). In addition, we point out a case of cytonuclear discordance between S. uncinus and S. gigas in the southwest corner of the Iberian Peninsula, suggesting the occurrence of an ancient event of genetic introgression between the two species.
Allele networks, cyto-nuclear discordances gene flow, genetic isolation, haplotype networks, introgression, mitochondrial DNA
Understanding the patterns and processes underlying the origin and distribution of lineages, both at intra- and supra- specific levels, is fundamental for testing taxonomic hypotheses (
Complex evolutionary dynamics, encompassing hybridization among morphologically similar species or lineages have usually driven to intense taxonomic debates (
The extend of hybrids zones and the fate of the parental lineages depends on the strength of the barriers to gene flow (
Scaurus Fabricius, 1775 (Coleoptera: Tenebrionidae) is a group of thermophilic darkling beetles comprised by 25 species widespread through the Mediterranean basin, with extensions into the Atlantic and Saharan regions (Escalera 1914; Labrique 2009, 2020;
The genus Scaurus is characterized by a conserved general morphology, which resulted in a complex taxonomic history for several species, including S. uncinus and S. gigas (see
In this work, we perform comparative phylogeographic analyses by combining mitochondrial and nuclear gene fragments of S. uncinus and S. gigas sampled over an extensive area that covers most of their respective distribution ranges. We aim to explore (1) the intraspecific patterns of mitochondrial and nuclear genetic variation in both species, (2) the existence of shared phylogeographic patterns and barriers to gene flow, (3) the strength of the reproductive barriers between these pairs of species, and (4) the nature of the morphological differentiation among the populations of S. gigas.
Thirty-seven specimens of S. gigas (N=14), S. ferreri (N=3), and S. uncinus (N=20) from the Iberian Peninsula and Morocco were preserved in 96° ethanol at 6°C for molecular DNA analyses. All specimens were injected with 96° ethanol before preservation. The studied specimens have been deposited in the entomological collection of the Museo Nacional de Ciencias Naturales (MNCN-CSIC), Madrid, Spain.
Genomic DNA was extracted from leg tissue using the Qiagen DNeasy commercial kit. PCR was used to amplify fragments of the cytochrome B (Cyt b) (30 specimens) and the nuclear internal transcribed spacer (ITS2) (33 specimens) genes. Although attempts were made to amplify genetic material from all 37 specimens, complete success was not achieved across all specimens. The Cyt b was amplified using the set of primers CB-J-10933/CB-N-11367 (
Sequences were collapsed into haplotypes using ALTER (
The studied populations of Scaurus gigas from the Iberian Peninsula and North Africa are represented by 12 Cyt b haplotypes, three are only found in the Iberian Peninsula, eight exclusively in Morocco, and a single one is shared at both sides of the Strait of Gibraltar (Fig.
Species identities, collecting localities, voucher numbers and GenBank accession numbers for the samples analyzed in this study.
Code | Species | Locality | Coordinates | Haplotype (Cyt b) | Cyt b Genbank code | Allele (ITS2) | ITS2 Genbank code |
---|---|---|---|---|---|---|---|
CDAS0047 | Scaurus gigas | Morocco: Essaouira: Ouassane – Sidi Kaouki | 31°22′48″N, 9°47′37″W | 4 | P0438088 | 1 | PQ435559 |
CDAS0048 | Scaurus gigas | Morocco: Essaouira: Ouassane – Sidi Kaouki | 31°22′48″N, 9°47′37″W | 6 | P0438089 | 1 | PQ435560 |
CDAS0050 | Scaurus gigas | Portugal: Faro: Lagos: Meia Praia | 37°06′59″N, 8°39′08″W | 8 | P0438082 | 3 | PQ435566 |
CDAS0051 | Scaurus gigas | Portugal: Faro: Lagos: Meia Praia | 37°06′59“N, 8°39′08″W | 8 | P0438083 | 3 | PQ435567 |
CDAS0112 | Scaurus gigas | Spain: Cádiz: Chipiona | 36°44′12″N, 6°25′45″W | 11 | P0438085 | — | — |
CDAS0114 | Scaurus gigas | Spain: Cádiz: Playa de Bolonia | 36°5′17″N, 5°46′21″W | 12 | P0438086 | 3 | P0435568 |
CDAS0115 | Scaurus gigas | Morocco: Tanger: Cap Espartel | 35°45′5″N, 5°55′56″W | 12 | P0438087 | — | — |
CDAS0117 | Scaurus gigas | Morocco: Tnine Chtouka (Tnine-des-Ghtouka) | 33°18′5″N, 8°9′18″W | — | — | 3 | PQ435569 |
CDAS0118 | Scaurus gigas | Morocco: between Diet and Larache | 35°31′34″N, 5°58′42″W | 10 | P0438084 | — | — |
CDAS0119 | Scaurus gigas | Morocco: Road Essaouira-Moulay Bouzerktoun | 31°35′46″N, 9°39′48″W | 3 | P0438090 | 1 | P0435561 |
CDAS0120 | Scaurus gigas | Morocco: 4 km S El Ghazoua | 31°25′09″N, 9°45′10″W | 3 | P0438091 | 1 | PO435562 |
CDAS0121 | Scaurus gigas | Morocco: 4 km S El Ghazoua | 31°25′09″N, 9°45′10″W | 7 | P0438092 | 1 | PQ435563 |
CDAS0124 | Scaurus gigas | Morocco: 3 km SW Afra (Imsouane) | 30°45′52″N, 9°49′16″W | 5 | P0438093 | 2 | PQ435564 |
CDAS0125 | Scaurus gigas | Morocco: 3 km SW Afra (Imsouane) | 30°45′52″N, 9°49′16″W | — | — | 2 | P0435565 |
CDAS0129 | Scaurus ferreri | Morocco: Aglou Beach | 29°49′05″N, 9°49′31″W | 1 | P0438094 | 4 | PQ435570 |
CDAS0130 | Scaurus ferreri | Morocco: Aglou Beach | 29°49′05″N, 9°49′31″W | 2 | P0438095 | 4 | PQ435571 |
CDAS0133 | Scaurus ferreri | Morocco: Deghaimis | 29°49′59″N, 9°45′55″W | 2 | PQ438096 | 4 | P0435572 |
CDAS0001 | Scaurus uncinus | Spain: Cadiz: Medina Sidonia | 36°26′59″N, 5°55′8″W | 13 | P0438097 | 5 | P0435573 |
CDAS0002 | Scaurus uncinus | Spain: Cadiz: Medina Sidonia | 36°26′59″N, 5°55′8″W | 14 | P0438104 | 5 | P0435574 |
CDAS0006 | Scaurus uncinus | Spain: Madrid: Sanchinarro, Valdefuentes | 40°30′07″N, 3°38′33″W | 13 | P0438099 | 5 | PO435575 |
CDAS0007 | Scaurus uncinus | Spain: Madrid: Sanchinarro, Valdefuentes | 40°30′07″N, 3°38′33″W | 13 | P0438098 | 6 | P0435581 |
CDAS0008 | Scaurus uncinus | Spain: Murcia: Fuente Álamo de Murcia | 37°43′12″N, 1°08′02″W | 19 | P0438109 | 5 | P0435576 |
CDAS0009 | Scaurus uncinus | Spain: Murcia: Fuente Álamo de Murcia | 37°43′12″N, 1°08′02″W | 20 | PQ438110 | 8 | P0435584 |
CDAS0013 | Scaurus uncinus | Spain: Navarra: Ablitas | 41°57′43″N, 1°36′12″W | — | — | 5 | P0435577 |
CDAS0014 | Scaurus uncinus | Spain: Navarra: Ablitas | 41°57′43″N, 1°36′12″W | 14 | P0438105 | 9 | P0435585 |
CDAS0017 | Scaurus uncinus | Morocco: E of Ifrane | 33°28′38″N, 5°01′39″W | — | — | 10 | P0435586 |
CDAS0018 | Scaurus uncinus | Morocco: E of Ifrane | 33°28′38″N, 5°01′39″W | — | — | 10 | P0435587 |
CDAS0024 | Scaurus uncinus | Morocco: Tanger | 35°17′58″N, 5°51′02″W | 14 | P0438101 | 7 | P0435582 |
CDAS0025 | Scaurus uncinus | Morocco: Tanger | 35°17′58″N, 5°51′02″W | 14 | P0438100 | 7 | PQ435583 |
CDAS0027 | Scaurus uncinus | Portugal: Faro: Loulé: Lombada | 37°09′59″N, 8°09′30″W | 9 | P0438081 | 5 | P0435578 |
CDAS0028 | Scaurus uncinus | Portugal: Faro: Loulé: Lombada | 37°09′59″N, 8°09′30″W | 18 | P0438106 | 5 | PQ435579 |
CDAS0029 | Scaurus uncinus | Morocco: 15 km S-SW Timahdite | 33°24′20″N, 5°07′17″W | 15 | P0438107 | — | — |
CDAS0030 | Scaurus uncinus | Morocco: 15 km S-SW Timahdite | 33°24′20″N, 5°07′17″W | 16 | P0438108 | 10 | PQ435588 |
CDAS0109 | Scaurus uncinus | Spain: Ceuta: Cala Desnarigado, Monte Hacho | 35°53′45″N, 5°16′54″W | 17 | P0438102 | 5 | P0435580 |
CDAS0110 | Scaurus uncinus | Spain: Ceuta: Cala Desnarigado, Monte Hacho | 35°53′45″N, 5°16′54″W | 17 | P0438103 | 10 | PQ435589 |
CDAS0092 | Scaurus uncinus | Morocco: El Hajeb | 33°42′10″N, 5°21′30″W | — | — | 11 | PQ435591 |
CDAS0093 | Scaurus uncinus | Morocco: El Hajeb | 33°42′10″N, 5°21′30″W | — | — | 10 | P0435590 |
Haplotype network based on Cyt b haplotypes for Scaurus gigas (Waltl, 1835) (red), Scaurus uncinus (Forster, 1771) (blue), and Scaurus ferreri Español, 1960 (green). Inferred intermediate haplotypes are counted with black numbers. Colors correspond to the geographic origin of the specimens. The size of the circles indicates the relative frequency of sequences belonging to a particular allele. The presence of S. uncinus outside the blue shaded area requires confirmation because it is easy to be confused with other species of similar morphology and the records are old and imprecise.
The studied populations of Scaurus uncinus presented eight Cyt b haplotypes. This species shows lower haplotype diversity than S. gigas. Four haplotypes are only found in the Iberian Peninsula, three only in Morocco, and one is shared across the Strait of Gibraltar. The studied population from Murcia (Spain) is separated by 10 mutations from the closest haplotype (Fig.
Allele networks based on ITS2 for the studied populations of S. gigas (15 specimens) and S. uncinus (20 specimens) were represented by four and seven alleles, respectively (Fig.
Allelic network based on partial sequences of the nuclear second Internal Transcribed Spacer (ITS2) for Scaurus gigas (Waltl, 1835) (red), Scaurus uncinus (Forster, 1771) (blue), and Scaurus ferreri Español, 1960 (green). Inferred intermediate alleles are represented by small black circles. Colors correspond to the geographic origin of the specimens. The size of the circles indicates the relative frequency of sequences belonging to a particular allele.
Scaurus uncinus, shows a higher allelic diversity than S. gigas, with seven ITS2 alleles observed. The most common allele is present both in the Iberian Peninsula, where it is widespread (at Faro, Cádiz, and Madrid), and in North Africa (at Ceuta). Also, three alleles are observed in North Africa and another three different alleles in the Iberian Peninsula. A single specimen morphologically identified as S. uncinus (CDAS0027, See Table
The Strait of Gibraltar, located between northwestern Africa and southwestern Europe, has acted as a geographical barrier for dispersion in different groups of small vertebrates and arthropods (
The large degree of genetic structure found in the S. gigas lineage indicates a long history of geographic isolation and diversification in the African continent. This pattern is reversed in S. uncinus, which presents a pattern of subtle genetic structuring only among the European populations. The main nuclear allele of S. uncinus is widespread over the central and southwestern region of the Iberian Peninsula, but it is also present in northern Morocco. This allelic distribution could be related to a rapid range expansion into the African continent (
Scaurus gigas has its meridional limit at the surroundings of the Draa valley in Morocco (
However, our results reveal the presence of a distinct haplotypic and nuclear lineage, closely related to S. gigas, found at the western foothills of the Anti-Atlas Mountains, south of the Souss Valley, specifically at Aglou Beach and Deghaimis. This population exhibits a morphology consistent with the type series of S. u. ferreri housed at the Museu de Ciències Naturals of Barcelona, confirming its alignment with specimens from Aglou and Deghaimis. The Aglou Beach population is located approximately 57 km north of the type locality of S. g. ferreri, well within the geographic range outlined by
Although, our sampling across the Souss valley is very limited to test for the existence of complete reproductive isolation between the two lineages, the concordance between morphology (Figs
Morphological differences between S. gigas (Tanger, Chipiona and Sidi Kaouki) and S. ferreri (Aglou and Deghaimis) (see Table
Live specimens and typical habitat of S. gigas (a–c) and S. ferreri (d–f). Specimens photographed are from (a) Meia Praia, Lagos (Portugal), (b) Chipiona, Cádiz (Spain), (d) Aglou Plage (Morocco) and (e) Deghaimis (Morocco). Landscape images represent (c) the northernmost range of S. gigas (near Sines, Portugal) and (f) one of the northern locations of S. ferreri at Aglou Plage (Morocco).
As expected by their morphological distinctiveness (
Transcontinental intraspecific patterns of colonization appear to be much common than previously expected between Africa and Europe for relatively large, flightless, xeric-adapted, species of terrestrial arthropods as darkling beetles (
Conflict of interest. The authors declare no conflict of interest.
Data availability statement. The molecular data newly generated for this study is available in GenBank. Accession numbers P0438082–P0438110 for Cyt b and PQ435559-PQ435590 for ITS2 sequences.
Funding. The authors declare that his study was funded by the project-grant PID2019-110243GB-100/AEI/10.13039/501100011033 (Ministerio de Ciencia e Innovación) to Mario García-Paris.
We thank E. Recuero Gil, J. Gutiérrez Rodríguez, J. L. Ruiz García, P. Mas-Peinado, N. Percino Daniel, N. Rosas Ramos, A. Zaldívar, G. García Martín, F. Alda, I. Martínez-Solano, J. Miller, M. Carrillo, L. Puerta Rodríguez, J. Morales-García, C. Settanni, P. Jurado-Angulo, L. Saínz Escudero, K. López-Estrada, J.E. Uribe Arboleda, and M. Calvo Revuelta for their help with fieldwork. We especially thank J. L. Ruiz for his advice and assistance at the Instituto de Estudios Ceutíes. We are also grateful to Pablo Vicent Castelló for his support during the lab work, as well as E. Karen López Estrada and Lucía Sainz Escudero for their help with the molecular analyses. We express our deep gratitude to Mercedes París, curator of Entomology at the Museo Nacional de Ciencias Naturales (Madrid), for her invaluable work and availability. Special thanks to Dr. Berta Caballero López, curator of the arthropod collection at the Museu de Ciències Naturals (Barcelona), and Sergi Gago Carrión for their speed and efficiency in providing us with study materials when time was of the essence. We also thank Javier Diéguez-Uribeondo, director of the ‘Master en Biodiversidad en Áreas Tropicales y su Conservación, UIMP-CSIC,’ for his unwavering support, dedication to teaching, and for playing the role of scientific matchmaker by introducing the authors of this article.