Research Article |
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Corresponding author: Matteo Vecchi ( matteo.vecchi15@gmail.com ) Academic editor: Brendon Boudinot
© 2025 Daniele Camarda, Oscar Lisi, Daniel Stec, Matteo Vecchi.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Camarda D, Lisi O, Stec D, Vecchi M (2025) Description of a new genus and species of Isohypsibioidea (Tardigrada), together with its mitochondrial genome sequence. Arthropod Systematics & Phylogeny 83: 427-445. https://doi.org/10.3897/asp.83.e150460
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Abstract
A new tardigrade taxon, Thulyphoribius melitense gen. nov. et sp. nov. is described from a population of limnic tardigrades collected in the sediment of a temporary pond in Malta. Those habitats, characterized by fluctuating environmental conditions and ephemeral water availability, provide a particularly challenging setting that can drive morphological and genetic diversity in aquatic microfauna. The new genus shows a unique combination of morphological characters, including distinctive morphologies of the peribuccal region, a short and wide ventral lamina and Pseudobiotus-type claws. Although it shares certain traits with some extant genera, the presence of unique characters combinations, precludes its assignment to any of the previously established genera. A comprehensive investigation was conducted, including morphological (using Phase-Contrast Light Microscopy, Scanning Electron Microscopy), morphometric, and molecular analysis. In the latter context, the molecular markers 18S, 28S, COI, and ITS2 were sequenced, and the complete mitochondrial genome was obtained and characterized, offering important insights for future molecular studies of tardigrades. Phylogenetic analyses based on Maximum Likelihood and Bayesian methods, incorporating the four aforementioned molecular markers, indicate that the new genus belongs to the superfamily Isohypsibioidea, yet it does not cluster within any currently recognized extant family of tardigrades. Collectively, these findings underscore the relevance of investigating underexplored habitats and highlight the potential for discovering novel evolutionary lineages among limnic microinvertebrates that inhabit temporary ponds.
Parachela, mitogenome, phylogeny, rock pools, systematics, taxonomy
Tardigrades are a phylum of meiofauna belonging to the clade Ecdysozoa Aguinaldo et al., 1997 (molting animals;
The tardigrade superfamily Isohypsibioidea Sands, McInnes, Marley, Goodall-Copestake, Convey & Linse, 2008 is very diverse in term of ecological strategies, including taxa that thrive in marine habitats (with the only marine eutardigrade genus Halobiotus Kristensen, 1982; e.g.
In this study we report the description of a new genus and species of an Isohypsibioidea found in a freshwater rock pool on Malta Island (Malta), a territory where the number of known tardigrade taxa is very low (11 according to
A sediment sample from a dry rock pool located near Qrendi, Malta, was collected on 23 March 2023. The sample was taken from the sediment surface (~2 cm depth) with a clean plastic spoon. The sample was kept desiccated until processing. Tardigrade extraction was performed by rehydrating the sediment with distilled water and inspecting it under a stereomicroscope. It was possible to keep the specimens in the culture for a limited time: a portion of dry sediment was placed in a Petri dish with ddH2O and algae (Chlorococcum sp.) at a temperature of 16–20°C with weekly water changes and feedings; many animals turned to active state, and the culture lasted approximately 6 months before dying.
To assess whether the morphological characters appeared consistent, specimens for light microscopy were mounted on microscope slides in a small drop of Hoyer’s or Polyvinyl Lactophenol (PVLF) medium, secured with a cover slip, and dried at 60°C for a week. Five exuviae with eggs were extracted from the sample and placed in ddH2O to obtain hatchlings, which were subsequently mounted on microscope slides as described above. Additional individuals were stained with Orcein (
All measurements are given in micrometers (μm). Structures were measured only if their orientation and integrity were suitable. Body length was measured from the anterior extremity to the posterior end of the body, excluding the hind legs. Buccal tube length and the level of the stylet support insertion point were measured according to
DNA was extracted from individual animals extracted from the sample following a Chelex® 100 resin (BioRad) extraction method by (
A phylogenetic reconstruction of the superfamily Isohypsibioidea was produced using the concatenated markers 18S rRNA + 28S rRNA. The same dataset as reported in
One individual of the new species (Iso_MT.008_WGA_1) was extracted from the sample and starved in sterile distilled water for 24 hours at 18°C, and then washed twice in sterile distilled water. The individual was then dissected in a 0.5 µl drop of sterile distilled water with a sterilized entomological needle and used as starting material for a Whole Genomic Amplification (WGA) reaction using the REPLI-g Mini Kit (Cat. No. 150023, Qiagen) according to the manufacturer protocol. The reaction product was purified with a GeneMAGNET PCR / DNA Clean-Up Purification Kit (Cat. No. E3420, EURx) and the dsDNA was quantified using a Qubit Fluorometric assay. Approximately 1.5 µg of amplified DNA were debranched for 1 hour with T7 Endonuclease I (Cat. No. M0302, New England Biolabs) according to the manufacturer protocol. The reaction product was again purified with the GeneMAGNET Kit and quantified with Qubit. The dsDNA was used as input for library preparation with the Oxford Nanopore Native Barcoding Kit 24v14 (Cat. No. SQK-NBD114.24, Oxford Nanopore Technologies, ONT) following the ONT community protocol NBE_9169_V114_REVP_15SEP2022 and sequenced on part of a FLO-MIN114 R10 flow cell using a MinION Mk1B for 48h. Basecalling, demultiplexing and adaptors trimming was done with the software MinKNOW (ONT) using a high accuracy basecalling. Sequences of the DNA Control Sample (DCS) introduced during library preparation were removed with chopper (
Clean reads were blasted against a tardigrades mitochondrial proteins database (
The phylogenetic reconstruction (Fig.
Mitogenome and phylogenetic position of Thulyphoribius melitense gen. nov. et sp. nov. A Mitogenome visualization: inner circle represents GC content. Arrows indicate direction of transcription. B Bayesian phylogenetic reconstruction of Isohypsibioidea: values above branches represent BI posterior probabilities (pp) / ML bootstrap (BS). Nodes with pp < 0.70 were collapsed. Scale bar indicates substitutions/site.
In the Nanopore sequencing run, after the removal of the DCS sequence, a total of 2.26 Gb of reads (n = 907920, N50 = 4950 bp, average quality = 15.21 Q) were obtained, of which 0.47% (10.59 Mb) of mitochondrial origin. The obtained mitochondrial genome (Fig.
A portmanteau of Thulinius and Doryphoribius, as the new genus possesses some morphological traits similar to those two genera.
The genus name, should be abbreviated as “Thp”, following the abbreviations adopted by (
Thulyphoribius melitense gen. nov. et sp. nov. by original designation and monotypy (Articles 68.2 and 68.3 of the ICZN, 1999).
Peribuccal lamellae or papulae absent, although in PCM, sometimes, internal septa in the buccal ring are visible giving the appearance of the presence of lamellae or papular lamellae. Buccal cone with 6 papular peribuccal lobes visible only under SEM and only when the buccal cone is fully extended (Fig.
Pseudobiotus morphotype of the Isohypsibius-type claws (
The new genus is morphologically and molecularly (Fig.
Among Doryphoribiidae, based on the presence of a rigid buccal tube, three macroplacoids and no microplacoid in the pharynx and a cuticle devoid of dorsal gibbosities, Thulyphoribius gen. nov. can be compared to Doryphoribius Pilato, 1969 (species in the zappalai group sensu
Diagnostic characters of Thulyphoribius gen. nov. compared with Doryphoribiidae genera with developed claws, 3+0 placoids configuration and without gibbosities in the cuticle. Y = character present; N = character absent; AISM = Apophyses of the stylet muscle insertion.
| Thulyphoribius gen. nov. | Doryphoribius (zappalai group)1 | Thulinius | Pseudobiotus 2 | Grevenius (asper group)3 | |
| Cuticle gibbosities | N | Y/N | N | N | N |
| Peribuccal structures | 6 papular peribuccal lobes | 6 peribuccal lobes | 6 peribuccal lobes | 6 peribuccal lobes | Peribuccal lobes absent5 |
| AISM | Short and thick ventral lamina (pt 35–45) | Long ventral lamina (pt >50) | No ventral lamina, symmetrical and ridge-like | No ventral lamina, symmetrical and ridge-like | No ventral lamina, symmetrical and ridge-like |
| Placoids number and configuration | 3+0 (1>3>2) | 3+0 (various configurations) | 3+0 (1>3>2) | 3+0 (3>1>2 or 1>3>2) | 3+0 (various configurations) |
| Placoids shape | 1° and 3° elongated, 2° granular | Granular or almost granular | 1° and 3° elongated, 2° granular | Elongated | 1° elongated, 2° granular |
| Basal portion of the claw (PCM) | Indented, resembling a “duck-foot” shape | Smooth | Smooth | Smooth | Smooth |
| Pseudolunulae | N | N | N | N | Y4 |
| Cuticular bars on legs | Long, present under both claws | N | Long, present under both claws | N | Single cuticular bar or no cuticular bars |
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1 species group according to (Michalczyk and Kaczmarek, 2010) 2 excluding P. megalonyx which has 2 macroplacoids and P. longiunguis, considered as species dubia according to ( |
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In particular, Thulyphoribius gen. nov. can be considered particularly similar to Doryphoribius (for the presence of a ventral lamina in the buccal apparatus) and Thulinius (by the shape of the placoids, claw structure and shape and presence of cuticular bars on legs). Therefore, we compare it below with these two genera.
The new genus differs from Doryphoribius by: The ventral lamina which has a peculiar shape, being very short and thick (pt 35–45 in the new genus vs pt > 50 in Doryphoribius, except for D. smokiensis which, however, possesses only two macroplacoids), resulting in a buccal tube morphology with a sharply curved proximal section (Figs
First and third macroplacoid have a bar-like shape, while the second has a granular shape, whereas in Doryphoribius (in species exhibiting three macroplacoids), all macroplacoids are granular (or almost granular) in shape.
Claws of the Pseudobiotus-type in the new genus according to
Claw bases provided with internal septa in the new genus while in Doryphoribius the septa in claw bases are absent.
A long cuticular bar under both internal and external bases of claws I–III is present, while cuticular bars on legs are absent in Doryphoribius.
The new genus differs from Thulinius by: The peribuccal cone surrounded externally to the buccal ring by 6 papular peribuccal lobes in the new genus, while ordinary peribuccal lobes are present in Thulinius.
Apophyses of the stylet muscle insertion (AISM) represented only by a single, large, ventral apophysis (i.e., the ventral lamina) in the new genus, whereas both ventral and dorsal crests are present, smaller and similar in shape, in Thulinius.
Claw bases provided with internal septa in the new genus whereas in Thulinius the septa in claw bases are absent.
The specific epithet refers to the location where the new species has been found (melitense meaning from Malta).
Malta • Qrendi, sediment collected in a dried freshwater rock pool; approximately 35°49'54"N; 14°26'29"E, elev. ~50 m, 23 March 2023; M.V. leg.
58 animals, and 11 cysts mounted on microscope slides in Hoyer’s medium; 12 animals mounted on microscope slides in Polyvinyl Lactophenol mounting medium (PVLF); 12 hatchlings mounted on microscope slides in PVLF, 4 exuviae on microscope slides in PVL. 7 animals prepared for SEM. 2 individuals used for DNA sequencing, 1 individual used for WGA and mitogenome sequencing.
Holotype with 5 paratypes (slide CT.6087 in Hoyer’s); 31 paratypes (slides: CT.6088–6095 in Hoyer’s); 20 paratypes (slides CT.6093–6099 in PVL); 7 animals mounted for SEM analysis (Stub No. UNICT-39) deposited at the University of Catania, Via Santa Sofia 102, Catania, Italy. 7 paratypes (slides: MT.008.01 – 02 in PVL), 32 paratypes (MT.008.03–08 in Hoyer’s) deposited at the Institute of Systematics and Evolution of Animals (Polish Academy of Sciences), Sławkowska 17, Kraków, Poland
Body size up to approximately 500 µm (Table
Thulyphoribius melitense gen. nov. et sp. nov., head and details of the oral cavity armature (OCA) and cuticle ornamentation. A Head with protruded buccal cone, showing the papular peribuccal lobes. B Detail of the mouth opening, showing the continuous buccal ring and the second band of teeth of the OCA. C–D Details of the buccal opening, showing the continuous buccal ring, dorsal (C) and ventral (D) teeth of the third band of the OCA. E Ornamented cuticle covered with small tubercles approximately 0.2 microns in size. Arrowheads indicate the second band of teeth, indented arrowheads indicate the third band of teeth, and asterisks indicate the papular peribuccal lobes. Scale bars = A: 10 μm; B: 2 μm; C–E: 5 μm.
Thulyphoribius melitense gen. nov. et sp. nov. bucco-pharyngeal apparatus under PCM. A Bucco-pharyngeal apparatus in toto, lateral view. B Detail of the buccal opening, showing the apparent lamellae. C Stylet furcae. D Detail of the first portion of the buccal tube, highlighting the distinctive ventral lamina. E. Placoids. Arrowheads indicate the notch in the middle portion of the ventral lamina. Indented arrowheads indicate a septum that, under PCM, gives the impression of peribuccal lamellae surrounding the mouth opening. Scale bars = A, E: 20 μm; B, C: 10 μm.
Measurements [in μm] and pt values of selected morphological structures of non-hatchlings specimens of Thulyphoribius melitense gen. nov. et sp. nov.; specimens mounted in Hoyer’s or Polyvinil Lactophenol medium (see File S1 for more details); N: number of specimen/structures measured; range: refers to the smallest and the largest structure among all measured specimens; SD: standard deviation.
| Character | N | Range | Mean | SD | Holotype | ||||||||
| µm | pt | µm | pt | µm | pt | µm | pt | ||||||
| Body length | 16 | 281 | – | 492 | 881 | – | 1312 | 381 | 1080 | 63 | 110 | 402 | 1220 |
| Buccal tube | |||||||||||||
| Buccal tube length | 21 | 23.5 | – | 40.9 | – | 34.0 | – | 5.2 | – | 32.9 | – | ||
| Stylet support insertion point | 21 | 17.2 | – | 29.5 | 67.7 | – | 73.4 | 23.7 | 69.8 | 3.8 | 1.6 | 22.9 | 69.4 |
| Buccal tube external width | 19 | 3.0 | – | 5.9 | 10.9 | – | 14.3 | 4.2 | 12.3 | 0.8 | 1.1 | 4.3 | 13.0 |
| Buccal tube internal width | 19 | 2.0 | – | 4.6 | 7.2 | – | 11.6 | 2.9 | 8.6 | 0.6 | 1.1 | 2.8 | 8.6 |
| Ventral lamina length | 19 | 10.0 | – | 15.5 | 35.0 | – | 43.9 | 13.2 | 39.0 | 1.7 | 2.3 | 13.2 | 40.0 |
| Placoid lengths | |||||||||||||
| Macroplacoid 1 | 19 | 3.9 | – | 8.6 | 15.5 | – | 21.1 | 6.1 | 17.8 | 1.4 | 1.7 | 5.7 | 17.4 |
| Macroplacoid 2 | 19 | 2.3 | – | 3.9 | 6.9 | – | 9.8 | 2.9 | 8.6 | 0.5 | 0.9 | 2.5 | 7.5 |
| Macroplacoid 3 | 19 | 3.0 | – | 6.5 | 11.4 | – | 15.8 | 4.7 | 13.8 | 1.0 | 1.2 | 4.4 | 13.4 |
| Macroplacoid row | 20 | 10.0 | – | 20.2 | 39.4 | – | 49.6 | 15.2 | 44.3 | 3.0 | 2.9 | 14.9 | 45.3 |
| Claw I heights | |||||||||||||
| External base | 9 | 5.2 | – | 10.5 | 16.4 | – | 25.9 | 7.5 | 21.4 | 2.0 | 3.3 | 7.3 | 22.1 |
| External primary branch | 6 | 15.1 | – | 24.7 | 50.3 | – | 60.7 | 20.1 | 56.3 | 3.7 | 4.3 | 19.5 | 59.3 |
| External secondary branch | 11 | 9.1 | – | 16.2 | 29.6 | – | 42.5 | 12.4 | 35.3 | 2.5 | 4.1 | 12.6 | 38.1 |
| External base/primary branch (cct) | 5 | 37.2 | – | 44.6 | – | 40.6 | – | 3.2 | – | 37.2 | – | ||
| Internal base | 8 | 5.7 | – | 8.8 | 18.2 | – | 21.6 | 6.8 | 20.0 | 1.1 | 1.2 | 7.1 | 21.6 |
| Internal primary branch | 8 | 9.8 | – | 18.1 | 35.7 | – | 45.7 | 12.8 | 39.6 | 2.5 | 3.1 | 13.7 | 41.4 |
| Internal secondary branch | 11 | 7.0 | – | 13.1 | 25.9 | – | 32.1 | 9.7 | 28.9 | 1.6 | 2.3 | 10.6 | 32.1 |
| Internal base/primary branch (cct) | 5 | 48.7 | – | 52.1 | – | 50.0 | – | 1.4 | – | 52.1 | – | ||
| Claw II heights | |||||||||||||
| External base | 14 | 5.6 | – | 10.0 | 17.9 | – | 26.4 | 7.3 | 21.3 | 1.5 | 2.3 | 7.4 | 22.3 |
| External primary branch | 9 | 14.6 | – | 24.9 | 46.0 | – | 62.8 | 18.2 | 54.2 | 3.3 | 5.4 | 20.7 | 62.8 |
| External secondary branch | 16 | 8.1 | – | 18.9 | 30.0 | – | 46.1 | 12.1 | 36.3 | 2.7 | 3.9 | 13.3 | 40.4 |
| External base/primary branch (cct) | 8 | 35.6 | – | 46.4 | – | 40.1 | – | 4.0 | – | 35.6 | – | ||
| Internal base | 17 | 4.5 | – | 9.4 | 17.8 | – | 26.1 | 7.1 | 21.1 | 1.4 | 2.1 | 7.7 | 23.4 |
| Internal primary branch | 12 | 9.5 | – | 18.7 | 35.6 | – | 47.5 | 13.5 | 41.3 | 2.6 | 3.2 | 14.1 | 42.7 |
| Internal secondary branch | 17 | 7.0 | – | 13.0 | 26.1 | – | 34.8 | 10.1 | 30.3 | 1.6 | 2.2 | 11.5 | 34.8 |
| Internal base/primary branch (cct) | 12 | 44.5 | – | 57.8 | – | 51.5 | – | 3.7 | – | 54.8 | – | ||
| Claw III heights | |||||||||||||
| External base | 9 | 4.8 | – | 9.3 | 17.8 | – | 22.8 | 6.6 | 19.8 | 1.5 | 1.6 | ? | ? |
| External primary branch | 8 | 11.4 | – | 23.9 | 43.5 | – | 59.4 | 16.5 | 50.8 | 4.9 | 5.6 | ? | ? |
| External secondary branch | 14 | 7.7 | – | 17.9 | 28.6 | – | 43.8 | 11.5 | 34.9 | 3.0 | 4.3 | ? | ? |
| External base/primary branch (cct) | 7 | 34.3 | – | 44.3 | – | 39.6 | – | 3.4 | – | ? | – | ||
| Internal base | 13 | 4.7 | – | 7.9 | 17.3 | – | 22.7 | 6.2 | 19.7 | 1.1 | 1.7 | 7.5 | 22.7 |
| Internal primary branch | 11 | 9.3 | – | 14.8 | 34.6 | – | 43.7 | 11.9 | 38.7 | 1.7 | 3.0 | 14.1 | 42.9 |
| Internal secondary branch | 14 | 6.6 | – | 11.0 | 24.5 | – | 32.8 | 9.1 | 29.1 | 1.3 | 2.0 | 10.8 | 32.8 |
| Internal base/primary branch (cct) | 11 | 43.6 | – | 57.0 | – | 50.4 | – | 3.8 | – | 52.9 | – | ||
| Claw IV heights | |||||||||||||
| Anterior base | 13 | 4.7 | – | 10.9 | 17.4 | – | 29.7 | 7.0 | 21.1 | 1.9 | 3.1 | 7.5 | 22.8 |
| Anterior primary branch | 12 | 10.1 | – | 20.4 | 37.7 | – | 50.0 | 14.3 | 42.7 | 3.0 | 3.5 | 15.1 | 45.8 |
| Anterior secondary branch | 13 | 7.3 | – | 13.0 | 27.3 | – | 33.3 | 9.9 | 30.1 | 1.8 | 1.9 | 10.5 | 31.8 |
| Anterior base/primary branch (cct) | 10 | 42.6 | – | 59.1 | – | 47.7 | – | 4.7 | – | 49.8 | – | ||
| Posterior base | 5 | 5.5 | – | 8.9 | 17.3 | – | 23.9 | 7.1 | 19.9 | 1.4 | 2.9 | 7.9 | 23.9 |
| Posterior primary branch | 7 | 14.0 | – | 22.6 | 44.8 | – | 57.0 | 18.1 | 52.9 | 3.1 | 4.6 | 18.0 | 54.8 |
| Posterior secondary branch | 12 | 8.4 | – | 14.9 | 28.7 | – | 42.7 | 11.6 | 34.9 | 2.2 | 4.3 | 12.5 | 37.8 |
| Posterior base/primary branch (cct) | 4 | 35.8 | – | 43.7 | – | 40.4 | – | 3.6 | – | 43.7 | – | ||
Measurements [in μm] and pt values of selected morphological structures of hatchling specimens of Thoriphorybius melitense gen. nov. et sp. nov.; specimens mounted in Polyvinil Lactophenol medium; N: number of specimen/structures measured; range: refers to the smallest and the largest structure among all measured specimens; SD: standard deviation.
| Character | N | Range | Mean | SD | |||||||
| µm | pt | µm | pt | µm | pt | ||||||
| Body length | 8 | 123 | – | 178 | 659 | – | 910 | 154 | 794 | 18 | 83 |
| Buccal tube | |||||||||||
| Buccal tube length | 8 | 18.7 | – | 19.8 | – | 19.3 | – | 0.4 | – | ||
| Stylet support insertion point | 8 | 12.8 | – | 14.3 | 67.6 | – | 72.0 | 13.6 | 70.1 | 0.5 | 1.6 |
| Buccal tube external width | 7 | 2.4 | – | 3.1 | 12.5 | – | 15.8 | 2.7 | 14.1 | 0.3 | 1.2 |
| Buccal tube internal width | 7 | 1.6 | – | 2.6 | 8.5 | – | 12.9 | 2.1 | 11.0 | 0.4 | 1.8 |
| Ventral lamina length | 8 | 7.0 | – | 9.0 | 37.5 | – | 45.5 | 8.0 | 41.4 | 0.7 | 2.8 |
| Placoid lengths | |||||||||||
| Macroplacoid 1 | 8 | 2.5 | – | 3.2 | 12.5 | – | 16.4 | 2.7 | 13.8 | 0.2 | 1.2 |
| Macroplacoid 2 | 8 | 1.3 | – | 1.8 | 7.0 | – | 9.4 | 1.6 | 8.4 | 0.2 | 0.8 |
| Macroplacoid 3 | 8 | 1.8 | – | 2.5 | 9.4 | – | 12.9 | 2.2 | 11.3 | 0.2 | 1.1 |
| Macroplacoid row | 8 | 7.0 | – | 8.6 | 37.2 | – | 43.7 | 7.7 | 39.8 | 0.5 | 2.0 |
| Claw I heights | |||||||||||
| External base | 2 | 4.4 | – | 4.7 | 22.9 | – | 24.1 | 4.6 | 23.5 | 0.2 | 0.9 |
| External primary branch | 1 | 7.2 | – | 7.2 | 37.2 | – | 37.2 | 7.2 | 37.2 | ? | ? |
| External secondary branch | 4 | 5.4 | – | 6.8 | 27.6 | – | 35.7 | 6.2 | 31.8 | 0.7 | 3.8 |
| External base/primary branch (cct) | 1 | 61.5 | – | 61.5 | – | 61.5 | – | ? | – | ||
| Internal base | 4 | 2.9 | – | 4.0 | 15.4 | – | 20.8 | 3.6 | 18.8 | 0.5 | 2.5 |
| Internal primary branch | 2 | 7.6 | – | 7.8 | 39.9 | – | 40.6 | 7.7 | 40.2 | 0.1 | 0.5 |
| Internal secondary branch | 5 | 5.3 | – | 6.8 | 28.1 | – | 34.4 | 5.8 | 30.1 | 0.6 | 2.7 |
| Internal base/primary branch (cct) | 2 | 38.0 | – | 51.7 | – | 44.9 | – | 9.7 | – | ||
| Claw II heights | |||||||||||
| External base | 2 | 4.6 | – | 4.7 | 23.9 | – | 24.1 | 4.6 | 24.0 | 0.0 | 0.2 |
| External primary branch | 0 | ? | ? | ? | ? | ? | ? | ||||
| External secondary branch | 3 | 5.6 | – | 6.6 | 28.2 | – | 33.7 | 6.2 | 31.7 | 0.5 | 3.0 |
| External base/primary branch (cct) | 0 | ? | – | ? | – | ? | – | ||||
| Internal base | 3 | 4.1 | – | 4.3 | 21.4 | – | 21.7 | 4.2 | 21.5 | 0.1 | 0.2 |
| Internal primary branch | 1 | 7.5 | – | 7.5 | 39.5 | – | 39.5 | 7.5 | 39.5 | ? | ? |
| Internal secondary branch | 3 | 5.3 | – | 5.9 | 27.8 | – | 29.5 | 5.6 | 28.7 | 0.3 | 0.9 |
| Internal base/primary branch (cct) | 1 | 54.2 | – | 54.2 | – | 54.2 | – | ? | – | ||
| Claw III heights | |||||||||||
| External base | 3 | 4.3 | – | 4.9 | 21.8 | – | 25.4 | 4.6 | 23.6 | 0.3 | 1.8 |
| External primary branch | 2 | 8.1 | – | 9.1 | 41.1 | – | 48.5 | 8.6 | 44.8 | 0.7 | 5.3 |
| External secondary branch | 4 | 5.8 | – | 6.6 | 29.5 | – | 33.9 | 6.2 | 32.2 | 0.3 | 1.9 |
| External base/primary branch (cct) | 1 | 4.2 | – | 4.2 | – | 4.2 | – | ? | – | ||
| Internal base | 2 | 4.1 | – | 4.2 | 21.5 | – | 21.7 | 4.2 | 21.6 | 0.1 | 0.2 |
| Internal primary branch | 2 | 5.7 | – | 7.1 | 28.6 | – | 38.1 | 6.4 | 33.4 | 1.0 | 6.7 |
| Internal secondary branch | 3 | 5.0 | – | 5.7 | 26.9 | – | 29.1 | 5.4 | 28.1 | 0.3 | 1.1 |
| Internal base/primary branch (cct) | 0 | ? | – | ? | – | ? | – | ||||
| Claw IV heights | |||||||||||
| Anterior base | 4 | 3.8 | – | 4.1 | 19.3 | – | 20.9 | 4.0 | 20.2 | 0.1 | 0.7 |
| Anterior primary branch | 3 | 7.2 | – | 7.9 | 36.4 | – | 41.2 | 7.5 | 38.8 | 0.4 | 2.4 |
| Anterior secondary branch | 5 | 5.2 | – | 5.9 | 26.7 | – | 30.0 | 5.7 | 29.0 | 0.3 | 1.3 |
| Anterior base/primary branch (cct) | 2 | 49.8 | – | 56.4 | – | 53.1 | – | 4.7 | – | ||
| Posterior base | 3 | 3.6 | – | 5.2 | 18.5 | – | 26.5 | 4.5 | 22.8 | 0.8 | 4.1 |
| Posterior primary branch | 4 | 8.6 | – | 9.8 | 45.1 | – | 50.1 | 9.4 | 48.1 | 0.5 | 2.2 |
| Posterior secondary branch | 5 | 5.9 | – | 6.8 | 31.6 | – | 34.8 | 6.5 | 33.4 | 0.4 | 1.4 |
| Posterior base/primary branch (cct) | 3 | 37.5 | – | 55.3 | – | 46.5 | – | 8.9 | – | ||
The oral cavity armature (OCA) is visible only in SEM and consists of two bands: the first band (probably homologous to the second band of teeth of the Macrobiotoidea) comprises small, rounded teeth (gradually decreasing in density toward the second band of teeth) (Fig.
Typically-shaped stylet furcae (according to
Three macroplacoids (length sequence: 2<3<1) are present: the first is very long and rod-shaped (more than twice the length of the second), with a slight median constriction; the second, located almost adherent to the first macroplacoid, is granular; and the third is rod-shaped and nearly twice the length of the second (Fig.
Claws are large and slender, similar to those of Thulinius, with humps on the primary branches of the internal claws (Fig.
Thulyphoribius melitense gen. nov. et sp. nov. – claws under phase contrast microscopy (PCM) and scanning electron microscopy (SEM). A, B Second pair of claws shown under PCM in Hoyer’s medium (A) and SEM (B). C Detail of the base of the external claw of the second pair of legs, shown under PCM, highlighting the internal septa. D, E Third pair of claws shown under PCM in Hoyer’s medium (D) and SEM (E). F, G Fourth pair of claws shown under PCM in Polyvinil Lactophenol medium (F) and SEM (G). Black asterisks indicate the base equipped with internal septa. White asterisks indicate the “hump” in the internal and anterior claws. Indented empty arrowheads indicate the cuticular bar at the base of the claws. Indented arrowheads indicate the small accessory points. Scale bars = A, B, D, E, G: 10 μm; C: 2 μm; F: 20 μm.
The claw bases on all claws appear internally septate (Fig.
Lunulae and pseudolunulae are absent; a long, thin and smooth cuticular bar is present under the claw bases of claws I–III (visible under both SEM and PCM, as observed in Fig.
Moreover, a wrinkled button-like cuticular fold is present above the claws of the I–III pair of legs (Fig.
Thulyphoribius melitense gen. nov. et sp. nov. - hatchling under Phase Contrast Microscope (PCM) in Polyvinil Lactophenol medium. A Habitus. B Bucco-pharyngeal apparatus in toto, lateral view. C Third pair of claws with barely visible cuticular bar under their base. D Fourth pair of claws. Scale bars = A: 50 μm; B–D: 10 μm.
Thulyphoribius melitense gen. nov. et sp. nov. – habitus and details of the legs under SEM (Stub No. UNICT.39). A habitus, ventral view. B First pair of legs. C Second pair of legs. D Third pair of legs. Arrowheads indicate the botton-like structures in the dorsal portion of the leg. Indented arrowhead indicates the small accessory points. Scale bars = A: 100 μm; B–D: 10 μm.
The animals form cysts that are dark in colour, ranging from dark green to nearly black (Fig.
Laid in the exuvia, with smooth chorion. Whitish/transparent in colour, round in shape and in number of 4–8 per exuvia.
Both sexes (see File S6 for males stained with orcein) are reported for this species, with no evident secondary sexual dimorphism. Multiple instances of a behaviour in which a single female is surrounded by 2–5 males that anchor themselves to her body using their mouth have been observed.
This study allowed for the identification of a new genus and species of tardigrade from superfamily Isohypsibioidea, which due to its unique combination of morphological characters and basal phylogenetic position in Isohypsibioidea that, if confirmed, may provide new insights into evolutionary hypotheses regarding limno-terrestrial tardigrades.
The new genus exhibits traits which for their evolutionary significance or peculiar morphological should be discussed: The presence of a ventral strengthening structure in the buccal apparatus (ventral lamina) is considered a constant character at generic level (Pilato and Binda, 2010a), but it shows variability at higher taxonomic levels: whereas it is present in all Macrobiotoidea Thulin, 1928 {in Marley et al. 2011} (
Around the buccal cone, peribuccal papular lobes visible only under SEM are present in the new genus (Fig.
“Button-like cuticular folds” are present on the frontal surface of legs I–III (Fig.
Internal septa at the base of claws I–IV (Fig.
The genetic analyses clearly indicated the distinctiveness of the new genus supporting its validity. Thulyphoribius gen. nov. has been recovered as a sister lineage of all the other sequenced Isohypsibioidea indicating the distinctiveness that could be potentially elevated to the family level. However, due to absence of clear traits differentiating the new genus compared to Doryphoribiidae, and a general lack of strongly distinctive traits separating Isohypsibioidea families, we preferred for the moment a more conservative and cautious choice, waiting for more data (e.g., more than one species to be analysed with more morphological and genetic traits) before instituting a new family. The mitogenome sequence of the new species shows an almost perfect syntheny with other Isohypsibioidea taxa and notably with the distantly related Ram. claudii, indicating a general conserver order of mitochondrial genes in Parachela. Due to the low number of available tardigrades mitogenomes, we could not leverage the newly generated one to produce a whole-mitogenome based phylogeny and confirm the unique phylogenetic position of the new species.
Thulyphoribius melitense n.sp. has been found in freshwater rock pools, which have been only recently explored in terms of tardigrade diversity that might be present in this ephemeral habitat (
This study was founded by the Polonez Bis grant No. 2022/45/P/NZ8/01512 to MV co-funded by the National Science Centre and the European Union framework Programme for Research and Innovation Horizon 2020 under the Marie Skłodowska-Curie grant agreement [No. 945339].
Files S1–S6
Data type: .zip
Explanation notes: File S1. Raw morphometric measurements – juveniles and adults. — File S2. Raw morphometric measurements – newborns. — File S3. GenBank sequences used in phylogenetic reconstructions. — File S4. mrbayes input with alignment used for phylogenetic reconstructions (.nexus file). — File S5. iqtree and mrbayes output trees (.nmk file). — File S6. Photographs of males stained with Orcein.